BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012A05SP1|AL426299
(778 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1606 1503 0.0
>3x_Contig1606
Length = 11468
Score = 1503 bits (755), Expect = 0.0
Identities = 769/778 (98%)
Strand = Plus / Plus
Query: 1 gatctacaacagttcaacaagcaattactccaactttgtgattcctcagtggctgaaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2630 gatctacaacagttcaacaagcaattactccaactttgtgattcctcagtggctgaaact 2689
Query: 61 agagaaaaaacagtaacagcattatcctacctaaaatcgcttgataacctatttggtaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2690 agagaaaaaacagtaacagcattatcctacctaaaatcgcttgataacctatttggtaaa 2749
Query: 121 ctggacgatatcacaaagctatcagaatcgctaaagatatgccagcaacttgtatcatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2750 ctggacgatatcacaaagctatcagaatcgctaaagatatgccagcaacttgtatcatcc 2809
Query: 181 ttacagtctatggtgcagctgaatatcgacgacgagctttccttcacagtggcaaagcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2810 ttacagtctatggtgcagctgaatatcgacgacgagctttccttcacagtggcaaagcag 2869
Query: 241 ctctctactatactaatacgttgtgactacagatttagacatttggaagacaatgattcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2870 ctctctactatactaatacgttgtgactacagatttagacatttggaagacaatgattcc 2929
Query: 301 accctaattactcgaatgagaaacgactttaaaagtattctcgagaccgcaaagccttta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2930 accctaattactcgaatgagaaacgactttaaaagtattctcgagaccgcaaagccttta 2989
Query: 361 attaaacccgttctcgagaagcagaaccagcaaactcaaaccataaaaacttaaatatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2990 attaaacccgttctcgagaagcagaaccagcaaactcaaaccataaaaacttaaatatat 3049
Query: 421 gataaatgcgaacccaattcaaataaagtgagattccaccccctaggtggaagcgagtct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3050 gataaatgcgaacccaattcaaataaagtgagattccaccccctaggtggaagcgagtct 3109
Query: 481 acgctatgagtatccttacgtaaatgtgtataacatctctgactttgagcctcatctcat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3110 acgctatgagtatccttacgtaaatgtgtataacatctctgactttgagcctcatctcat 3169
Query: 541 cataatgaacgatcttgaatttttcagttcttcacaacaaaagcatcaacaaacatcaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3170 cataatgaacgatcttgaatttttcagttcttcacaacaaaagcatcaacaaacatcaca 3229
Query: 601 actaacattaaatctatwakadcgaactgncaatatagcngggccagcgtnctaacagaa 660
||||||||||||||||| | | ||||||| ||||||||| |||||||||| |||||||||
Sbjct: 3230 actaacattaaatctataagaacgaactgacaatatagcagggccagcgtactaacagaa 3289
Query: 661 cactgttaatatcgataakgttcaattttctgtcatcaattagccatgtttggtgcagtg 720
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 3290 cactgtgaatatcgataaggttcaattttctgtcatcaattagccatgtttggtgcagtg 3349
Query: 721 aattcgggaaatagttcaatgaacaatggcggcggtttatttkgtaacaaacctgctg 778
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 3350 aattcgggaaatagttcaatgaacaatggcggcggtttatttggtaacaaacctgctg 3407
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5477
Number of Sequences: 1807
Number of extensions: 5477
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 778
length of database: 10,358,551
effective HSP length: 16
effective length of query: 762
effective length of database: 10,329,639
effective search space: 7871184918
effective search space used: 7871184918
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)